SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_038000054
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skeletal muscle
Biosample name: RH18
Genomic region: chr12:6528311-6557691
Size: 29380
Super-enhancer rank 54
Number of SE elements: 3
ChIP density(Case|Control): 142757.42|3795.896
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAPDH;
ROSE Overlap GAPDH; NOP2; NCAPD2; IFFO1;
ROSE Proximal SCARNA11; IFFO1; MRPL51; NOP2; CHD4; SCARNA10;
ROSE Closest GAPDH;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_038000054 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers