SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_031300004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-DZ
Genomic region: chr17:47975072-48026064
Size: 50992
Super-enhancer rank 4
Number of SE elements: 5
ChIP density(Case|Control): 97593.5888|7572.312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDK5RAP3;
ROSE Overlap CDK5RAP3;
ROSE Proximal COPZ2; NFE2L1; PRR15L; PNPO; MIR152;
ROSE Closest CDK5RAP3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031300004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers