SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_031100429
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr1:31745641-31799891
Size: 54250
Super-enhancer rank 429
Number of SE elements: 7
ChIP density(Case|Control): 32273.325|6065.15
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BAI2 ;
ROSE Overlap MIR4254 ; SPOCD1 ; BAI2 ;
ROSE Proximal COL16A1 ;
ROSE Closest BAI2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA COL16A1 ; SPOCD1 ; BAI2 ; MIR4254 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100429 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers