SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100427
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr8:141368666-141417556
Size: 48890
Super-enhancer rank 427
Number of SE elements: 6
ChIP density(Case|Control): 33382.092|7005.937
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTP4A3 ;
ROSE Overlap ;
ROSE Proximal GPR20 ; PTP4A3 ; LOC731779 ;
ROSE Closest GPR20 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01300 ; GPR20 ; PTP4A3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100427 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers