SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr12:54351060-54389035
Size: 37975
Super-enhancer rank 400
Number of SE elements: 5
ChIP density(Case|Control): 32043.305|4686.115
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF385A ;
ROSE Overlap ZNF385A ; GPR84 ; COPZ1 ;
ROSE Proximal MIR148B ; ITGA5 ; ZNF385A ;
ROSE Closest GPR84 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ITGA5 ; COPZ1 ; ZNF385A ; NFE2 ; LOC102724050 ; HNRNPA1 ; CBX5 ; MIR148B ; GPR84 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers