SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100364
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr12:57126615-57176396
Size: 49781
Super-enhancer rank 364
Number of SE elements: 7
ChIP density(Case|Control): 34861.6343|5600.3625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LRP1 ;
ROSE Overlap LRP1 ;
ROSE Proximal NXPH4 ; NAB2 ; TMEM194A ; STAT6 ; MIR1228 ;
ROSE Closest LRP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SHMT2 ; NXPH4 ; STAT6 ; NAB2 ; STAC3 ; NDUFA4L2 ; TMEM194A ; MIR1228 ; LRP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100364 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers