SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100274
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr3:119635303-119682365
Size: 47062
Super-enhancer rank 274
Number of SE elements: 5
ChIP density(Case|Control): 41334.5546|6155.7096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POPDC2 ;
ROSE Overlap COX17 ; POPDC2 ;
ROSE Proximal C3orf15 ; PLA1A ;
ROSE Closest POPDC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLA1A ; ADPRH ; POPDC2 ; MAATS1 ; CD80 ; COX17 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100274 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers