SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_031100224
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr6:27126216-27150944
Size: 24728
Super-enhancer rank 224
Number of SE elements: 1
ChIP density(Case|Control): 41501.0024|2784.3728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H4I ;
ROSE Overlap HIST1H2BK ; HIST1H2AH ; HIST1H4I ; HIST1H2AG ; MIR3143 ; HIST1H2BJ ;
ROSE Proximal ;
ROSE Closest HIST1H4I ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIST1H4I ; HIST1H2AH ; HIST1H2BJ ; MIR3143 ; HIST1H2AG ; HIST1H2BK ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100224 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers