SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_031100178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr1:153531301-153551560
Size: 20259
Super-enhancer rank 178
Number of SE elements: 1
ChIP density(Case|Control): 47408.0859|4063.9554
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: S100A5 ;
ROSE Overlap S100A6 ; S100A4 ; S100A3 ; S100A5 ;
ROSE Proximal S100A2 ;
ROSE Closest S100A5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA S100A5 ; S100A1 ; S100A13 ; S100A4 ; S100A2 ; CHTOP ; S100A3 ; S100A14 ; S100A16 ; S100A7 ; LOC101928034 ; S100A6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers