SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_031100131
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr3:128453900-128499492
Size: 45592
Super-enhancer rank 131
Number of SE elements: 6
ChIP density(Case|Control): 55079.6952|5466.4808
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJB8 ;
ROSE Overlap DNAJB8 ; GATA2 ;
ROSE Proximal LOC90246 ;
ROSE Closest DNAJB8 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC90246 ; GATA2 ; DNAJB8-AS1 ; LINC01565 ; DNAJB8 ; GATA2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100131 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers