SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100115
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr12:109695525-109775530
Size: 80005
Super-enhancer rank 115
Number of SE elements: 11
ChIP density(Case|Control): 61419.8385|9040.565
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C12ORF34 ;
ROSE Overlap C12orf34 ; MGC14436 ;
ROSE Proximal TRPV4 ;
ROSE Closest C12orf34 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRPV4 ; FAM222A ; FAM222A-AS1 ; MIR4497 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100115 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers