SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100074
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr11:1946050-1996549
Size: 50499
Super-enhancer rank 74
Number of SE elements: 3
ChIP density(Case|Control): 67517.163|4746.906
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100133545 ;
ROSE Overlap MRPL23 ; LOC100133545 ; H19 ;
ROSE Proximal MIR675 ; TNNT3 ;
ROSE Closest LOC100133545 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNNT3 ; HOTS ; MIR675 ; MRPL23 ; H19 ; MRPL23-AS1 ; LINC01219 ; MIR7847 ; LINC01150 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100074 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers