SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_028400004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Pelvis
Biosample name: patient 119
Genomic region: chr2:176072695-176119186
Size: 46491
Super-enhancer rank 4
Number of SE elements: 1
ChIP density(Case|Control): 177465.4452|4086.5589
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXD13;
ROSE Overlap HOXD12; HOXD11; EVX2; HOXD13; HOXD10;
ROSE Proximal HOXD4; HOXD9; MIR10B; HOXD3; HOXD8;
ROSE Closest HOXD13;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_028400004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers