SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_028000499
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: SUM159_DMSO_24h
Genomic region: chr17:42658410-42680760
Size: 22350
Super-enhancer rank 499
Number of SE elements: 3
ChIP density(Case|Control): 21706.32|3115.59
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLEKHH3;
ROSE Overlap CCR10; TUBG2; PLEKHH3;
ROSE Proximal CNTNAP1; TUBG1; FAM134C;
ROSE Closest PLEKHH3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_028000499 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers