SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_028000171
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: SUM159_DMSO_24h
Genomic region: chr12:52492987-52525281
Size: 32294
Super-enhancer rank 171
Number of SE elements: 4
ChIP density(Case|Control): 36669.837|6187.5304
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT5;
ROSE Overlap KRT5; KRT6A;
ROSE Proximal KRT6C; KRT71; KRT6B; KRT74;
ROSE Closest KRT5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_028000171 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers