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Super-enhancer overview

SE ID: SE_02_026000488
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Other
Tissue type: Lung
Biosample name: NCI-H1299_EGFP-NEO_reporter_cells_SB939
Genomic region: chr12:53993931-54001307
Size: 7376
Super-enhancer rank 488
Number of SE elements: 1
ChIP density(Case|Control): 19014.5904|245.6208
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXC9;
ROSE Overlap HOXC9;
ROSE Proximal MIR196A2; HOTAIR; MIR615; HOXC10; HOXC12; HOXC8; HOXC6; HOXC11; HOXC4; HOXC5;
ROSE Closest HOXC9;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_026000488 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers