SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_023200055
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Tonsil
Biosample name: ILC3
Genomic region: chr6:45415038-45553910
Size: 138872
Super-enhancer rank 55
Number of SE elements: 39
ChIP density(Case|Control): 48855.1696|11762.4584
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RUNX2 ;
ROSE Overlap RUNX2 ;
ROSE Proximal SUPT3H ;
ROSE Closest RUNX2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RUNX2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_023200055 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers