SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_023000087
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Umbilical cord
Biosample name: ID60
Genomic region: chr12:120229311-120248350
Size: 19039
Super-enhancer rank 87
Number of SE elements: 7
ChIP density(Case|Control): 10298.1951|2480.7817
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN;
ROSE Overlap PXN;
ROSE Proximal GCN1L1; RPLP0;
ROSE Closest PXN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_023000087 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers