SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_021900243
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231
Genomic region: chr12:3303994-3313780
Size: 9786
Super-enhancer rank 243
Number of SE elements: 4
ChIP density(Case|Control): 3973.116|935.5416
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TSPAN9;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest PRMT8;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_021900243 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers