SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_018100028
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: melanoma
Biosample name: COLO679
Genomic region: chr12:120220179-120265758
Size: 45579
Super-enhancer rank 28
Number of SE elements: 11
ChIP density(Case|Control): 51198.8907|7342.7769
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN;
ROSE Overlap PXN;
ROSE Proximal GCN1L1; SIRT4; RPLP0;
ROSE Closest PXN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_018100028 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers