SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_016700406
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1954_LCC2
Genomic region: chr1:145977413-146007676
Size: 30263
Super-enhancer rank 406
Number of SE elements: 5
ChIP density(Case|Control): 29984.4369|7804.6254
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TXNIP;
ROSE Overlap TXNIP; POLR3GL;
ROSE Proximal RBM8A; HFE2; ANKRD34A; LIX1L;
ROSE Closest TXNIP;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_016700406 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers