SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_014600486
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: LP-1_SGC-CBP30
Genomic region: chr2:216080229-216092888
Size: 12659
Super-enhancer rank 486
Number of SE elements: 4
ChIP density(Case|Control): 10601.9125|2115.3189
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM169 ;
ROSE Overlap PECR ; TMEM169 ;
ROSE Proximal TMEM169 ; XRCC5 ;
ROSE Closest TMEM169 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PECR ; XRCC5 ; TMEM169 ; MREG ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_014600486 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers