SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_014600384
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: LP-1_SGC-CBP30
Genomic region: chr2:47300056-47323521
Size: 23465
Super-enhancer rank 384
Number of SE elements: 9
ChIP density(Case|Control): 12093.861|2222.1355
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR559 ;
ROSE Overlap ;
ROSE Proximal EPCAM ;
ROSE Closest EPCAM ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC101927043 ; MSH2 ; MIR559 ; EPCAM ; BCYRN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_014600384 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers