SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_014600294
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: LP-1_SGC-CBP30
Genomic region: chr1:161179575-161204880
Size: 25305
Super-enhancer rank 294
Number of SE elements: 6
ChIP density(Case|Control): 16119.285|4322.094
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ADAMTS4 ;
ROSE Overlap NDUFS2 ; ADAMTS4 ;
ROSE Proximal DEDD ; B4GALT3 ; PPOX ; FCER1G ; USP21 ; TOMM40L ; NR1I3 ; APOA2 ; UFC1 ;
ROSE Closest ADAMTS4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA USP21 ; NR1I3 ; NIT1 ; DEDD ; UFC1 ; PPOX ; TOMM40L ; NDUFS2 ; FCER1G ; MIR5187 ; KLHDC9 ; ADAMTS4 ; PCP4L1 ; B4GALT3 ; APOA2 ; PFDN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_014600294 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers