SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_013800001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: RT172
Genomic region: chr3:147353608-147426836
Size: 73228
Super-enhancer rank 1
Number of SE elements: 4
ChIP density(Case|Control): 277036.1696|6385.4816
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZIC4;
ROSE Overlap ZIC4; ZIC1;
ROSE Proximal ZIC4;
ROSE Closest ZIC4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_013800001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers