SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_012500691
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: Embryonic-stem-cells_Primed
Genomic region: chr1:1406146-1412056
Size: 5910
Super-enhancer rank 691
Number of SE elements: 2
ChIP density(Case|Control): 7812.429|498.213
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MRPL20;
ROSE Overlap MRPL20;
ROSE Proximal AURKAIP1; TMEM88B; VWA1; LOC441869; MXRA8; ATAD3C; LOC148413; CCNL2;
ROSE Closest MRPL20;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_012500691 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers