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Super-enhancer overview

SE ID: SE_02_012400784
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: Embryonic-stem-cells_Naive
Genomic region: chr1:1405945-1410376
Size: 4431
Super-enhancer rank 784
Number of SE elements: 1
ChIP density(Case|Control): 15168.6423|462.1533
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MRPL20;
ROSE Overlap MRPL20;
ROSE Proximal AURKAIP1; TMEM88B; VWA1; LOC441869; MXRA8; ATAD3C; LOC148413; CCNL2;
ROSE Closest MRPL20;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_012400784 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers