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Super-enhancer overview

SE ID: SE_02_012400474
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: Embryonic-stem-cells_Naive
Genomic region: chr1:40694357-40728535
Size: 34178
Super-enhancer rank 474
Number of SE elements: 4
ChIP density(Case|Control): 22779.637|4053.5108
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100130557;
ROSE Overlap NFYC;
ROSE Proximal NFYC; MIR30E; MIR30C1; RIMS3; LOC100130557;
ROSE Closest LOC100130557;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_012400474 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers