SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_012400110
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: Embryonic-stem-cells_Naive
Genomic region: chr19:53658453-53672616
Size: 14163
Super-enhancer rank 110
Number of SE elements: 1
ChIP density(Case|Control): 38551.686|2283.0756
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR512-2;
ROSE Overlap MIR512-1; MIR1323; MIR512-2;
ROSE Proximal MIR520B; MIR519B; MIR520F; MIR526A1; MIR521-2; MIR517B; MIR520G; DPRX; MIR526B; MIR520C; MIR520E; MIR520A; MIR519D; MIR518F; MIR519E; MIR519C; MIR517A; MIR518B; MIR523; MIR498; MIR525; MIR524; MIR515-1; MIR1283-1; MIR518C; MIR520D;
ROSE Closest MIR512-2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_012400110 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers