SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_009100180
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Umbilical cord
Biosample name: umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0
Genomic region: chr12:46547227-46563123
Size: 15896
Super-enhancer rank 180
Number of SE elements: 5
ChIP density(Case|Control): 20965.2344|1637.288
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC38A2;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest SLC38A2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_009100180 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers