SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_008900352
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Umbilical cord
Biosample name: umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3
Genomic region: chr4:128568961-128574738
Size: 5777
Super-enhancer rank 352
Number of SE elements: 1
ChIP density(Case|Control): 17593.8535|616.9836
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHF17;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest PHF17;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_008900352 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers