SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_006800029
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skin
Biosample name: A375_DMSO
Genomic region: chr3:53139128-53197219
Size: 58091
Super-enhancer rank 29
Number of SE elements: 9
ChIP density(Case|Control): 145761.9372|15092.0418
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKCD;
ROSE Overlap PRKCD;
ROSE Proximal RFT1;
ROSE Closest PRKCD;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_006800029 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers