SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_006400644
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo
Biosample name: DN-Early_G1
Genomic region: chr12:54277985-54282391
Size: 4406
Super-enhancer rank 644
Number of SE elements: 1
ChIP density(Case|Control): 4862.4616|414.164
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap HNRNPA1P10; HNRNPA1; CBX5;
ROSE Proximal CBX5; NFE2; COPZ1;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_006400644 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers