SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_005500002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Lung
Biosample name: IMR-90_Nutlin-3a
Genomic region: chr17:48536342-48599307
Size: 62965
Super-enhancer rank 2
Number of SE elements: 1
ChIP density(Case|Control): 395231.305|7442.463
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB3;
ROSE Overlap HOXB4; HOXB6; LOC404266; HOXB2; HOXB5; HOXB3; MIR10A;
ROSE Proximal HOXB1; MIR196A1; HOXB9; HOXB8; HOXB7;
ROSE Closest HOXB3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_005500002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers