SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_004900715
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo endodermal
Biosample name: CyT49_GTtoH
Genomic region: chrX:153969799-153973838
Size: 4039
Super-enhancer rank 715
Number of SE elements: 1
ChIP density(Case|Control): 8407.5824|87.6463
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HCFC1;
ROSE Overlap HCFC1; TMEM187;
ROSE Proximal MIR718; ARHGAP4; MIR3202-1; NAA10; RENBP; MIR3202-2; IRAK1;
ROSE Closest HCFC1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004900715 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers