SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_004900630
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo endodermal
Biosample name: CyT49_GTtoH
Genomic region: chr1:6601357-6626149
Size: 24792
Super-enhancer rank 630
Number of SE elements: 3
ChIP density(Case|Control): 10261.4088|1485.0408
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHF13;
ROSE Overlap PHF13; KLHL21; THAP3;
ROSE Proximal NOL9; TAS1R1; ZBTB48;
ROSE Closest PHF13;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004900630 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers