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Super-enhancer overview

SE ID: SE_02_004900608
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo endodermal
Biosample name: CyT49_GTtoH
Genomic region: chr12:54257564-54262881
Size: 5317
Super-enhancer rank 608
Number of SE elements: 1
ChIP density(Case|Control): 9881.1128|966.0989
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap CBX5;
ROSE Proximal HNRNPA1P10; NFE2; HNRNPA1;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004900608 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers