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Super-enhancer overview

SE ID: SE_02_004900129
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo endodermal
Biosample name: CyT49_GTtoH
Genomic region: chr16:3003902-3022815
Size: 18913
Super-enhancer rank 129
Number of SE elements: 3
ChIP density(Case|Control): 18373.9795|1477.1053
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN9;
ROSE Overlap HCFC1R1; CLDN9; CLDN6; TNFRSF12A;
ROSE Proximal IL32; KREMEN2; PKMYT1; MMP25; THOC6; CCDC64B; PAQR4; LOC283875; HCFC1R1;
ROSE Closest CLDN9;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004900129 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers