SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_004900124
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo endodermal
Biosample name: CyT49_GTtoH
Genomic region: chr9:137217747-137237448
Size: 19701
Super-enhancer rank 124
Number of SE elements: 4
ChIP density(Case|Control): 18522.8802|1270.7145
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC643596;
ROSE Overlap C9orf169; SLC34A3; NDOR1; RNF208; LOC643596;
ROSE Proximal TPRN; FAM166A; NDOR1; C9orf173; C9orf167; MIR3621; LRRC26; ANAPC2; SSNA1; COBRA1; TMEM203; TUBB2C;
ROSE Closest LOC643596;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004900124 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers