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Super-enhancer search result
Super-enhancer detail
Super-enhancer overview
SE ID:
SE_02_004900096
Species:
Human
Data source:
NCBI GEO/SRA
Biosample type:
Cell line
Tissue type:
Embryo endodermal
Biosample name:
CyT49_GTtoH
Genomic region:
chr21:41703434-41718491
Size:
15057
Super-enhancer rank
:
96
Number of SE elements:
2
ChIP density(Case|Control):
20673.261|1623.1446
Genome browser:
Super-enhancer associated network
Super-enhancer annotation
Common SNP
eQTL
Risk SNP
TFBS conserved
CRISPR/Cas9 target site
DHS
Enhancer
Methylation-450K
TAD
Chromatin accessibility region
Methylation-WGBS
Chromatin interaction
1~5
5~10
10~MAX
Super-enhancer associated genes
Strategies/Algorithm
Gene name
The closest active:
C21ORF129
;
ROSE Overlap
NCRNA00112
;
C21orf129
;
ROSE Proximal
RIPK4
;
NCRNA00111
;
ROSE Closest
C21orf129
;
Lasso
;
PreSTIGE
;
Network diagram of super-enhancer and associated genes
Expression of
SE_02_004900096
associated genes
Cell line (ENCODE)
Primary cell (ENCODE)
Normal tissue (GTEx)
Cell line (CCLE)
Cancer (TCGA)
TF Binding to Super-enhancer
TF Predicted by Motif
TF Identified by ChIP-seq
Super-enhancer element (H3K27ac)
1~5
5~10
10~MAX
GREAT
Download bed
Overlap with other super-enhancers