SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_004000603
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: PFG
Genomic region: chr3:48424204-48434194
Size: 9990
Super-enhancer rank 603
Number of SE elements: 1
ChIP density(Case|Control): 20018.9667|1314.8156
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNB1;
ROSE Overlap PLXNB1; CCDC51;
ROSE Proximal CCDC72; ATRIP; TREX1;
ROSE Closest PLXNB1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_004000603 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers