SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_003900590
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: AFG
Genomic region: chr1:1399435-1434735
Size: 35300
Super-enhancer rank 590
Number of SE elements: 9
ChIP density(Case|Control): 22560.23|2562.78
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC441869;
ROSE Overlap MRPL20; LOC441869; TMEM88B; LOC148413;
ROSE Proximal AURKAIP1; ATAD3B; VWA1; MXRA8; ATAD3C; CCNL2;
ROSE Closest LOC441869;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_003900590 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers