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Super-enhancer overview

SE ID: SE_02_003900088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: AFG
Genomic region: chr6:31713413-31777559
Size: 64146
Super-enhancer rank 88
Number of SE elements: 10
ChIP density(Case|Control): 50553.4626|5959.1634
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSH5;
ROSE Overlap MSH5; C6orf26; LY6G6E; LY6G6D; CLIC1; C6orf25; C6orf27; VARS; DDAH2; LY6G6C;
ROSE Proximal BAT5; LY6G5B; GPANK1; MSH5; LY6G5C; LSM2; C6orf25; HSPA1L; CSNK2B; HSPA1A; LY6G6F;
ROSE Closest MSH5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_003900088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers