SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_003900062
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: AFG
Genomic region: chr6:34223063-34249706
Size: 26643
Super-enhancer rank 62
Number of SE elements: 6
ChIP density(Case|Control): 53048.8773|2488.4562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMGA1;
ROSE Overlap HMGA1; C6orf1;
ROSE Proximal C6orf1; HMGA1;
ROSE Closest HMGA1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_003900062 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers