SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001900434
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Other
Tissue type: Embryo
Biosample name: Neural crest cells
Genomic region: chr12:6923361-6929743
Size: 6382
Super-enhancer rank 434
Number of SE elements: 1
ChIP density(Case|Control): 25252.9358|1160.2476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATN1;
ROSE Overlap ENO2; ATN1;
ROSE Proximal RPL13P5; PTPN6; C12orf57; PHB2; DSTNP2; SCARNA12; LRRC23; EMG1; MIR141; MIR200C;
ROSE Closest ATN1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001900434 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers