SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_001800229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo
Biosample name: NEC
Genomic region: chr12:54256873-54263192
Size: 6319
Super-enhancer rank 229
Number of SE elements: 2
ChIP density(Case|Control): 8912.9495|568.71
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap CBX5;
ROSE Proximal HNRNPA1P10; NFE2; HNRNPA1;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001800229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers