SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001500145
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Liver
Biosample name: HepG2_shNS
Genomic region: chr1:1430089-1439228
Size: 9139
Super-enhancer rank 145
Number of SE elements: 1
ChIP density(Case|Control): 31448.2129|1448.5315
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VWA1;
ROSE Overlap VWA1;
ROSE Proximal TMEM88B; MRPL20; LOC441869; ATAD3B; ATAD3C; LOC148413; CCNL2;
ROSE Closest VWA1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001500145 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers