SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001109
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:54447489-54461612
Size: 14123
Super-enhancer rank 1109
Number of SE elements: 2
ChIP density(Case|Control): 31988.8875|2316.5
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LENG8 ;
ROSE Overlap LENG8 ;
ROSE Proximal LAIR2 ; TTYH1 ; LENG9 ; CDC42EP5 ;
ROSE Closest LENG8 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TTYH1 ; LAIR1 ; LAIR2 ; CDC42EP5 ; LENG8 ; KIR3DX1 ; LENG8-AS1 ; LENG9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001109 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers