SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001094
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:47228480-47258763
Size: 30283
Super-enhancer rank 1094
Number of SE elements: 7
ChIP density(Case|Control): 33005.4417|3061.6113
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BBC3 ;
ROSE Overlap BBC3 ; CCDC9 ;
ROSE Proximal MIR3191 ; MIR3190 ; BBC3 ; PRR24 ;
ROSE Closest BBC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BBC3 ; INAFM1 ; MIR3190 ; C5AR1 ; C5AR2 ; MIR3191 ; CCDC9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001094 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers