SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001084
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr21:45292174-45331952
Size: 39778
Super-enhancer rank 1084
Number of SE elements: 9
ChIP density(Case|Control): 35135.9074|5075.6728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC642852 ;
ROSE Overlap LOC642852 ;
ROSE Proximal POFUT2 ;
ROSE Closest LOC642852 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA POFUT2 ; LOC642852 ; LINC00316 ; COL18A1-AS2 ; COL18A1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001084 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers